Sequencing
Nov 6, 2025
Cellular Deconvolution
Cellular deconvolution is an important analytical step for experiments that rely on samples that could comprise several different cell types (e.g. bulk RNA-seq, spatial genomics, etc.). Though these experiments are...
May 22, 2025
Improved Inference For SPLASH
This post builds off my earlier post on concentration inequalities and empirical Bernstein bounds. Here, I’m going to try to apply those ideas to get a better bound on the...
Feb 27, 2025
SPLASH
There is an exciting new framework for reference-free genomic discovery called SPLASH (Statistically Primary aLignment Agnostic Sequence Homing) from the Salzman Lab at Stanford1 2. It’s super cool, and there...